Student Theses and Dissertations

 

The Rockefeller University has awarded over one thousand Ph.D’s since 1959. This collection contains theses beginning with the graduating class of 2006. Earlier theses are added by request or as permission to digitize is received. For more information visit the FAQ page.

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2008

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Conditional Protein Alleles and Regulation of Bacterial Transcription: A Thesis in Two Acts, Edmund Ching Schwartz

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Cellular and Molecular Mechanisms Underlying Leptin’s Metabolic Effects, Amandeep Singh

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Crystal Structure and Mechanism of Lysine Specific Demethylase-1, Pete G. Stravropoulos

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The Apollo Nuclease Binds To TRF2 and Protects, Megan van Overbeek

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Dendritic Cells in Normal and Inflamed Human Skin, Lisa C. Zaba

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Identification of Loss of Specific FMRP-RNA Interactions as a Cause of Fragile X Syndrome, Julie B. Zang

2007

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A New Type of Programmed Cell Death in C. Elegans, Mary C. Abraham

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Regulation of Histone Covalent Modifications During Yeast Apoptosis, Sung Hee Ahn-Upton

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Kh Domains on Brain Polyribosomes: FMRP and Nova in Translational Regulation, Claire Elizabeth Fraser

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The Role of Microglia in the Effects of Steroid Hormones on Brain Inflammation, Andres C. Gottfried-Blackmore

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The Role of Pot1 in Telomere Protection and Maintenance, Dirk Hockemeyer

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Comparative Studies of Processivity Clamp Loader ATP Site Function., Aaron M. Johnson

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Insect Host Seeking: Investigations into the Molecular Mechanisms of Chemosensation, Walton D. Jones

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The Role of Histone H2B Ubiquitylation and its Related Factors in Transcriptional Regulation in Mammalian Cells, Jaehoon Kim

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A Search for the Counter-Immune Mechanisms of Mycobacterium Tuberculosis, Meghan Alida Kirksey

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Energy Homeostasis During Fasting and Fed States: Foxa2 Regulates Hepatic Amino Acid Uptake, Vivian M. Lee

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Haplotype-Based Association Studies: Approaches to Current Challenges, Mark A. Levenstien

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Chronic Stress Effects on Prefrontal Cortical Structure and Function, Conor Liston

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A Genetic-Proteomic Approach to Identify Cellular Components that Interact with HIV-1, Yang Luo

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The Role of Activation-Induced Cytidine Deaminase in Antibody Diversification and B Cell Malignancies, Eleonora Market

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The Multifunctional Capsid Gene of Hepatitis C Virus, Laura Katherine McMullan

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A Map of Transcription Factor Expression in Neuronal Precursors of the Chicken and Mouse Embryonic Cerebellum, Daniver Morales

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Genetic and Biochemical Analyses of the Flaviviridae Capsid Proteins, Catherine Lucy Murray

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A Structural Basis for Host Cytoskeletal Disruption and Virulence by Yersinia Protein Kinase A, Gerd Prehna

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Molecular Regulation of Hair Follicle Morphogenesis, Horace Rhee

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From Naturally Occurring Tumor Immunity to Supernatural T Cells: Isolation and Characterization of a Murine T Cell Receptor Specific for Human Breast and Ovarian Tumor Antigen Cdr2, Bianca D. Santomasso

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Autophagy Delivers Viral Antigens for MHC Class II Presentation and is Regulated by Viral Infection, Dorothee Schmid

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Death by Frustration: How Defects in Cell Differentiation Trigger Apoptosis, Ann H. Tang

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Targeted Disruption of Lynx2 Reveals Distinct Functions for Lynx Homologues in Learning and Behavior, Ayse Begum Tekinay

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Dissecting the Entry Pathways of Hepatitis C and Bovine Viral Diarrhea Viruses, Donna M. Tscherne

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Genetic and Molecular Characterization of Programmed Cell Death in the C.elegans Tail-Spike Cell, Carine Waase-Maurer

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Characterization and Functional Analysis of Astrotactin 2 Reveals a Role for Endocytosis in Glial-guided Neuronal Migration, Perrin Megan Wilson

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Role of Laminins in the Development of the Peripheral Nervous System, Wei-Ming Yu

2006

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TMEM27: A Cleaved and Shed Plasma Membrane Protein That Stimulates Pancreatic Beta Cell Proliferation, Pinar Akpinar

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Integration of Light and Temperature in the Regulation of Circadian Gene Expression in Drosophila, Catharine E. Boothroyd

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Telomere Structure and Shortening in Telomerase-Deficient Trypanosoma brucei: Implications for Anitgenic Variation, Oliver Dreesen

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The Role of Drosophila Odorant Receptors in Odor Coding, Elane Fishilevich

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NKAINs: A Novel Family of Membrane Proteins that Interact with the Na, K-ATPase and Affect Membrane Excitability, Svetlana Gorokhova

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Role of Laminin gamma 1 in Cortical Development, Veronique Haegeli

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Self-Renewal Requirements of Human Embryonic Stem Cells and Their Engraftment Potential in Mouse Blastocysts, Daylon Jefferson James

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Dendritic Cells Mediate the Dual Effects of IFN alpha/beta in HCV Immunity, Randy Longman

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Microarray Analysis Identifies Novel Cholesterol Regulated Genes, Including Pcsk9 Which Regulates LDL Receptor Function and LDL Cholesterol Levels, Kara Noelle Maxwell

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Glyoxylate Metabolism in Mycobacterium smegmatis, Lubomir Nikolaev Merkov

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Exploring the Biophysical Properties of Domains Within Multi-Domain Proteins, Vasant Muralidharan

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Immunologic Memory to Polysaccharide Antigens, Tetyana V. Obukhanych

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The Roles of daf-6 and Cell-Cell Interactions in Sensory Organ Morphogenesis, Elliot A. Perens

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Studies on the Histone Methyltransferase G9a, Srihari Cidambi Sampath

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Control of Chromosome Segregation by the Aurora B Complex, Srinath Cidambi Sampath

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A Molecular Dissection of the Ventromedial Hypothalamic Nucleus, Jeremy P. Segal

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The Dual Role of OCA-B in B Cell Development and Signaling, Rachael Siegel

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Structural Analysis of an RNA Polymerase Sigma Factor and Its Anti-sigma: sigma28/FLGM, Margareta K. Sörenson

2005

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Exploring the Early Events in the HIV-1 Life Cycle: From Post-Entry Restriction to Nuclear Import, Tshaka J. Cunningham

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Genetic and Biochemical Studies on Protein Phosphorylation in the Circadian Clock of Drosophila Melanogaster, Saul Kivimae

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The Role of the Glyoxylate Cycle in the Pathogenesis of Mycobacterium tuberculosis, Ernesto Javier Munoz-Elias

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Myosin-Like Proteins in S. cerevisiae: Multifunctional, Structural Components of the Nuclear Envelope, Mario Niepel

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The Structural and Functional Analysis of a Voltage-Dependent Potassium Channel, Vanessa Ruta

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Comparative Analysis of Alternative Splicing in Homo sapiens, Mus musculus and Rattus norvegicus Transcriptomes, Bahar Taneri

2004

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Site and Mechanism of Leptin's Antisteatotic and Insulin Sensitizing Actions in Lipodystrophic Liver, Esra Asilmaz

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Using Microscopy to Examine Mechanisms of Cell Division, Lily Copenagle

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Attenuated Salmonella Typhimurium Can Be Used to Transduce Human Dendritic Cells Towards Vaccination Against HIV-1, Deborah Gurner

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Differential Screening in Immunodeficient Mice Reveals Bacterial Enzymes With Unexpected Roles in Host-Pathogen Interactions, Katherine B. Hisert

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Life Without GPR7, the Neuropeptide W1 Receptor: Regulation of Energy Homeostasis by GPR7 and its Endogenous Neuropeptide Ligands, Makoto Ishii

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Roles for the E3 Ligase Itch in Immune Response Modulation, Sukhvinder Kaur Sahota

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Molecular Basis of Vertebrate Embryonic Migration, Paris A. Skourides

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A Novel Subfamily of Three StAR-Related Lipid Transfer Proteins That Are Differentially-Regulated and Function in Intracellular Cholesterol Metabolism, Raymond E. Soccio

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Resonant Detection of Nano to Microscopic Objects Using Whispering Gallery Modes, Frank Vollmer

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Functional analyses of hTel2 and TRF2 deltaB: Insights Into the Role of a New DNA Damage Pathway and Homologous Recombination in Mammalian Telomere Function, Richard Chih-Chien Wang

2003

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Measurement of the Diffractive Structure Function of the Antiproton in Proton-Antiproton Collisions at √ s = 1800 and 630 GeV, Kenichi Hatakeyama

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Isolation and Characterization of Estrogen Receptor- Interacting Proteins, Yun Kyoung Kang

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RCK Domain Model of Calcium Activation in BK Channels, Alexander R. Pico

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Subcellular Localization and Activity of the Multidrug Resistance Protein 1, Asha Rajagopal

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Identification and Characterization of the DNA Damage Response Function of Human Rif1 and a Search For Human Rap1 Interacting Factors, Joshua Silverman

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Protein Semi-Synthesis in Vivo, Izabela Giriat Stankiewicz

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Functional Roles of Nova in RNA Metabolism, Giovanni Stefani

2002

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Transcription, Editing, and Switching of Antibody Genes, Rafael Casellas

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Leptin and the Control of Body Weight and Metabolism: Role for Stearoyl CoA Desaturase-1 and Other Leptin-Regulated Genes in the Liver, Paul Cohen

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Biogenesis and Traffic of the Potassium Channel, Natalie de Souza

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Nova Regulation of Alternative Splicing in the CNS, B Kate Dredge

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Site-Specific Incorporation of Biochemical and Biophysical Probes into Proteins Using Expressed Protein Ligation, Mande Holford

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Targeting Receptor-Histidine Kinase Signaling in Staphylococcus Aureus, Gholson J. Lyon

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Stress and Hippocampal Plasticity, Kara Pham

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Mapping Genes for Complex Traits: Obesity, Diabetes, Hypertension, and Dyslipidemia on the Pacific Island of Kosrae, Dvora Shmulewitz

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ZIPRO1: Fine Tuning Proliferation in Discrete Cell Populations, Christopher Wynder

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Structural Studies of DNA Replication Proteins by X-Ray Crystallography and Molecular Dynamics, Yanxiang Zhao

2001

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Emerging Auditory Selectivity in the Caudomedial Neostriatum of the Zebra Finch Songbird, Caroline Wan-Yin Ang

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Mechanisms of TRAFSignaling, Joseph R. Arron

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Impact of Thymectomy on the Peripheral T Cell Pool in the Context of SIV Infection, Sarah Tuttleton Arron

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Molecular Anatomy of a Living Nerve Terminal: Actin and Synapsin in the Synaptic Vesicle Cycle, Ona E. Bloom

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Receptor- G Protein Interactions in the Visual System: A Study of Structures and Mechanisms That Couple the Cytoplasmic Surface of Rhodopsin to the Nucleotide-Binding Pocket of Transducin, Ethan P. Marin

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Genetic Studies on the Circadian Clock in the Model Organism Drosophila Melanogaster, Sebastian Martinek

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Antigenic Variation and Telomere Structure in Trypanosoma brucei, Jorge Luis Munoz Jordan

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Interactions between Nova and brPTB Proteins in Alternative Splicing and Nuclear Localization, Alexandros Demetrios Polydorides

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Genetic and Molecular Analysis of Islet-and Liver-Enriched Transcription Factors in Metabolism and Development, David Quan Shih

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Functional Analysis of the Human Telomeric Protein TRF2, Agata Smogorzewska

2000

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Dynamics of DNA Breathing and Folding for Molecular Recognition and Computation, Gregoire Bonnet

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Structure-Function Studies on Human Epithelial Cystic Fibrosis Chloride Channels Expressed in Xenopus Laevis Oocytes, Laszlo Csanady

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An Alternative View of the Templates and Functions of RNA Polymerase II, Julija Filipovska

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A Niche for Adult Neurogenesis: Analysis of BMP Signaling and Transcriptional Profiles of Adult Subventricular Zone Cells, Daniel A. Lim

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Information Encoding by Individual Neurons and Groups of Neurons in the Primary Visual Cortex, Daniel Salo Reich

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The Brain Invaders: Widespread Neuronal Dispersion in Developing and Adult Mammalian Brain, Hynek Wichterle